<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">IJOC</journal-id><journal-title-group><journal-title>International Journal of Organic Chemistry</journal-title></journal-title-group><issn pub-type="epub">2161-4687</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/ijoc.2018.83020</article-id><article-id pub-id-type="publisher-id">IJOC-86423</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Biomedical&amp;Life Sciences</subject><subject> Chemistry&amp;Materials Science</subject></subj-group></article-categories><title-group><article-title>
 
 
  Computational Study for the Aromatic Nucleophilic Substitution Reaction on 1-Dimethylamino-2,4-bis(trifluoroacetyl)-naphthalene with Amines
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Norio</surname><given-names>Ota</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Tomohiro</surname><given-names>Nakada</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Takumi</surname><given-names>Shintani</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Yasuhiro</surname><given-names>Kamitori</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Etsuji</surname><given-names>Okada</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>Department of Chemical Science and Engineering, Graduate School of Engineering, Kobe University, Kobe, Japan</addr-line></aff><author-notes><corresp id="cor1">* E-mail:<email>okaetsu@kobe-u.ac.jp(EO)</email>;</corresp></author-notes><pub-date pub-type="epub"><day>01</day><month>08</month><year>2018</year></pub-date><volume>08</volume><issue>03</issue><fpage>273</fpage><lpage>281</lpage><history><date date-type="received"><day>7,</day>	<month>May</month>	<year>2018</year></date><date date-type="rev-recd"><day>29,</day>	<month>July</month>	<year>2018</year>	</date><date date-type="accepted"><day>2,</day>	<month>August</month>	<year>2018</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Our previous research showed that aliphatic amines were put in order of high reactivit
  y as “ethylamine &gt; ammonia &gt; t-butylamine &gt; diethylamine” on the aromatic nucleophilic substitution of 1-dimetylamino-2,4-bis(trifluoroacetyl)-naphthalene <b>1</b> in acetonitrile. The DFT calculation study (B3LYP/6-31G* with solvation model) for the reactions of <b>1</b> with above four amines rationally explained the difference of each amines reactivity based on the energies of their Meisenheimer complexes <b>3</b> which are assumed to formed as the reaction intermediates in the course of the reaction giving the corresponding N-N exchange<b> </b>products<b> 2</b>. Intramolecular hydrogen bond between amino proton in 1-amino group and carbonyl oxygen in 2-trifluoroacetyl group stabilizes Meisenheimer complexes <b>3</b> effectively, and accelerates the substitution reaction from <b>1</b> to <b>2</b>. Our calculation results also predicted that the above order of amines is also true if less polar toluene is used as a solvent instead of acetonitrile even though more enhanced conditions are required.
 
</p></abstract><kwd-group><kwd>1-Amino-2</kwd><kwd>4-bis(trifluoroacetyl)naphthalenes</kwd><kwd> Aliphatic Amines</kwd><kwd> Meisenheimer Complexes</kwd><kwd> Aromatic Nucleophilic Substitution</kwd><kwd> DFT Calculation</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>In our previous research, we found that dimethylamino group on naphthalene system activated by two trifluoroacetyl groups is easily substituted with various nucleophiles, even though such substituent is commonly understood to have a poor leaving-group ability [<xref ref-type="bibr" rid="scirp.86423-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.86423-ref2">2</xref>] [<xref ref-type="bibr" rid="scirp.86423-ref3">3</xref>] . This unique aromatic nucleophilic substitution has provided diverse synthetic methods having capability to access a lot of kinds of fluorine-containing heterocycles [<xref ref-type="bibr" rid="scirp.86423-ref4">4</xref>] - [<xref ref-type="bibr" rid="scirp.86423-ref14">14</xref>] . These are the class of fluorine-containing heterocycles of which potential biological activities might be focused on as unique active ingredients in the various life science fields [<xref ref-type="bibr" rid="scirp.86423-ref15">15</xref>] [<xref ref-type="bibr" rid="scirp.86423-ref16">16</xref>] [<xref ref-type="bibr" rid="scirp.86423-ref17">17</xref>] [<xref ref-type="bibr" rid="scirp.86423-ref18">18</xref>] . On the above investigations was attained a newfound knowledge in which the N-N exchange reaction rate of aliphatic amines resulted in order of decreasing as “ethylamine &gt; ammonia &gt; t-butylamine &gt; diethylamine” by making observations for the reaction of 1-dimetylamino-2,4-bis(trifluoroacetyl)naphthalene 1 in acetonitrile (Scheme 1) [<xref ref-type="bibr" rid="scirp.86423-ref19">19</xref>] . This reactivity order is hard to be understood by traditional electronic theories of organic chemistry.</p><p>Therefore, these situations prompted us to demonstrate the DFT calculation (RB3LYP/6-31G*) study on the reaction of 1 with the above four kinds of amines to have led to an interesting outcome rationalizing the reaction rate order of the four amines. Moreover, we discuss an elucidation of the solvent effect on the present substitution by making use of C-PCM model calculation.</p></sec><sec id="s2"><title>2. Results and Discussion</title><sec id="s2_1"><title>2.1. Calculations for 1-Dimethylamino-2,4-bis(trifluoroacetyl)naph-thalene</title><p>First, we calculated the optimized structure of 1-dimetylamino-2,4-bis(trifluoroacetyl)- naphthalene 1 which is the key substrate of the present nucleophilic substitution. In <xref ref-type="fig" rid="fig1">Figure 1</xref> is depicted an estimated most stable structure of 1 in acetonitrile together with its energy. It also shows LUMO of 1 and its frontier electron densities ( f r LUMO ) at the 1-C of naphthalene ring and the carbonyl carbons of two trifluoroacetyl groups. The value of f r LUMO at the 1-C is considerably larger than the ones of both carbonyl carbons. This discrepancy of f r LUMO suggests the predominant attack by amino nucleophiles on the 1-C of 1 giving the Meisenheimer complex 3 which are assumed to be formed as the intermediates on the present substitution course (Scheme 2).</p></sec><sec id="s2_2"><title>2.2. Calculations for Meisenheimer Complexes</title><p><xref ref-type="fig" rid="fig2">Figure 2</xref> shows four computed structures of Meisenheimer complexes 3a-d and each energies, which are formed by the reaction of 1-dimetylamino-2,4- bis(trifluoroacetyl)-naphthalene 1 with ethylamine, ammonia, t-butylamine, and diethylamine respectively in acetonitrile solvent. These structures are varied, but</p><disp-formula id="scirp.86423-formula1"><graphic  xlink:href="//html.scirp.org/file/1-1020632x5.png"  xlink:type="simple"/></disp-formula><p>Scheme 1. The reaction of 1-dimetylamino-2,4-bis(trifluoroacetyl)naphthalene 1 with amines.</p><disp-formula id="scirp.86423-formula2"><graphic  xlink:href="//html.scirp.org/file/1-1020632x7.png"  xlink:type="simple"/></disp-formula><p>Scheme 2. The substitution pathway from 1 to N-N exchanged products 2.</p><p>within the margin of error, from ones estimated by the simple DFT calculations without using solvation model. The Meisenheimer complexes 3a-c have intramolecular hydrogen bond between amino proton and carbonyl oxygen in 2-trifluoroacetyl group respectively, but 3d does not due to the absence of amino proton. In respect to these hydrogen bonds, in <xref ref-type="fig" rid="fig2">Figure 2</xref> are indicated the computed values of distance and Mulliken bond orders (in parentheses).</p></sec><sec id="s2_3"><title>2.3. Calculations for N-N Exchanged Products</title><p><xref ref-type="fig" rid="fig3">Figure 3</xref> shows the optimized structures of four N-N exchanged products 2a-d afforded by the reaction of 1-dimetylamino-2,4-bis(trifluoroacetyl)naphthalene 1 with ethylamine, ammonia, t-butylamine, and diethylamine in acetonitrile. Similar to the cases of Meisenheimer complexes 3a-c, intramolecular hydrogen bonding between amino proton and carbonyl oxygen of 2-trifluoroacetyl group are formed in 2a-c. Moreover, the exhibited values are the estimated energies and bond lengths as well as Mulliken bond orders (in parentheses) of hydrogen bonds.</p></sec><sec id="s2_4"><title>2.4. Analyses for Reaction Processes</title><p>Energy diagrams of the present substitution course from 1-dimetylamino-2,4- bis(trifluoroacetyl)naphthalene 1 to the corresponding N-N exchanged products 2a-d are depicted in <xref ref-type="fig" rid="fig4">Figure 4</xref>. The rate determining step of this substitution would be the first addition step (Step 1) giving the corresponding adducts 3a-d in which one of the aromatic benzene-ring systems is destroyed. It is hard to estimate directly the transition state structures and their energies in the rate determining step since the present available computational methods cannot enable us to access an exact transition state structure of ionic reaction in polar solvents. However, it is possible to approximate activation energies of the rate determining step using energy changes (ΔE<sub>1</sub>) from substrate 1 to Meisenheimer complexes 3a-d which have the structures relatively close to each transition states.</p><p><xref ref-type="table" rid="table1">Table 1</xref> summarizes the computed energies of the substrate 1 and Meisenheimer complexes 3a-d, in which values are worked out under the two conditions. The one is using solvation model and the other one is not using it. Acetonitrile (aprotic polar solvent) and toluene (aprotic less polar solvent) was adopted as</p><table-wrap id="table1" ><label><xref ref-type="table" rid="table1">Table 1</xref></label><caption><title> Energies of the substrate 1 and Meisenheimer complexes 3a-d</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="2"  >Compound</th><th align="center" valign="middle"  colspan="3"  >E (au.)</th></tr></thead><tr><td align="center" valign="middle" >Solv.: None<sup>a</sup></td><td align="center" valign="middle" >Acetonitrile</td><td align="center" valign="middle" >Toluene</td></tr><tr><td align="center" valign="middle" >1 3a 3b 3c 3d</td><td align="center" valign="middle" >−1420.55312 −1555.19499 −1476.57275 −1633.81209 −1633.79469</td><td align="center" valign="middle" >−1420.56579 −1555.26133 −1476.64055 −1633.87740 −1633.86033</td><td align="center" valign="middle" >−1420.55988 −1555.23358 −1476.61229 −1633.84997 −1633.83274</td></tr></tbody></table></table-wrap><p>a. Simple DFT calculation results without using solvation model.</p><p>the solvation models. The energy values of <xref ref-type="table" rid="table1">Table 1</xref> lead to the estimated energy increments (ΔE<sub>1</sub>) shown in <xref ref-type="table" rid="table2">Table 2</xref> respectively. The largest ΔE<sub>1</sub> value is given in the case of the reaction of 1 with ammonia based on the simple DFT calculation without the use of solvation model. Additionally, ΔE<sub>1</sub> of the reaction of 1 with amines decreases according to the order of “ammonia &gt; diethylamine &gt; t-butylamine &gt; ethylamine” (<xref ref-type="table" rid="table2">Table 2</xref>). The results predicts that amines are put in order of high reaction rate as “ethylamine &gt; t-butylamine &gt; diethylamine &gt; ammonia” on the N-N exchange reaction of 1 though this assumption is not compatible with the experimental results (ethylamine &gt; ammonia &gt; t-butylamine &gt; diethylamine). We also calculated overall energy changes (ΔE<sub>2</sub>) from 1 to 2a-d to afford the computed values as the order of “ammonia (−16.1 kcal/mol) &lt; ethylamine (−12.6 kcal/mol) &lt; t-butylamine (−4.3 kcal/mol) &lt; diethylamine (4.1 kcal/mol)”. This order is also not coincident with the experimental results even if this N-N exchange reaction of 1 is affected by thermodynamic control. In contrast, in the case of the reaction of 1 with ethylamine to afford 3a, the least ΔE<sub>1 </sub>for the reaction in acetonitrile is given by DFT calculations under solvation model. As a result, the increasing order of ΔE<sub>1</sub> becomes computationally evident as “ethylamine &lt; ammonia &lt; t-butylamine &lt; diethylamine”, which suggests the acceleration of the N-N exchange reaction on 1 in the order of “ethylamine &gt; ammonia &gt; t-butylamine &gt; diethylamine”. This order is completely consistent with our experimental evidence examined previously. It allows us to explain that stabilization by intramolecular hydrogen bond in Meisenheimer complexes 3a-c would be one of the reasons why ΔE<sub>1</sub> on the reaction affording 3a-c are smaller than the case of 3d.</p><p>We also calculated ΔE<sub>1</sub> about the reaction in toluene. As shown in <xref ref-type="table" rid="table2">Table 2</xref>, ΔE<sub>1</sub> in toluene are larger than ones in acetonitrile in all cases. It follows that the substitution reaction of 1 with amines in less-polar toluene is predicted to require more enhanced conditions than the one in polar acetonitrile.</p><p>The ΔE<sub>1</sub> values in toluene predict that the order of amines on the substitution rate in toluene is the same as the one in acetonitrile. Differences of ΔE<sub>1</sub> values between the reactions in toluene and the corresponding ones in acetonitrile are summarized in <xref ref-type="table" rid="table3">Table 3</xref>. In the case of the reaction with ammonia, ΔE<sub>1</sub> is obviously more decreased than the cases using the other three amines in acetonitrile solvent instead of toluene. Meisenheimer complex 3b has one more amino</p><table-wrap id="table2" ><label><xref ref-type="table" rid="table2">Table 2</xref></label><caption><title> Energy changes ΔE<sub>1</sub> on the rate determining steps from 1 to 3a-d</title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="2"  >Nucleophile</th><th align="center" valign="middle"  rowspan="2"  >Process</th><th align="center" valign="middle"  colspan="3"  >ΔE<sub>1</sub> (kcal/mol)</th></tr></thead><tr><td align="center" valign="middle" >Solv.: None<sup>a</sup></td><td align="center" valign="middle" >Acetonitrile</td><td align="center" valign="middle" >Toluene</td></tr><tr><td align="center" valign="middle" >EtNH<sub>2</sub> NH<sub>3</sub> t-BuNH<sub>2</sub> Et<sub>2</sub>NH</td><td align="center" valign="middle" >1 &#224; 3a 1 &#224; 3b 1 &#224; 3c 1 &#224; 3d</td><td align="center" valign="middle" >101.8 114.4 105.6 109.1</td><td align="center" valign="middle" >7.2 10.1 16.7 20.9</td><td align="center" valign="middle" >45.8 52.2 53.1 57.0</td></tr></tbody></table></table-wrap><p>a. Simple DFT calculation results without using solvation model.</p><table-wrap id="table3" ><label><xref ref-type="table" rid="table3">Table 3</xref></label><caption><title> Solvent effects on ΔE<sub>1</sub></title></caption><table><tbody><thead><tr><th align="center" valign="middle"  rowspan="2"  >Nucleophile</th><th align="center" valign="middle"  rowspan="2"  >Process</th><th align="center" valign="middle"  colspan="2"  >ΔE<sub>1</sub> (kcal/mol)</th><th align="center" valign="middle"  rowspan="2"  >ΔE<sub>1</sub>(toluene) − ΔE<sub>1</sub>(acetonitrile) (kcal/mol)</th></tr></thead><tr><td align="center" valign="middle" >Solv.: Toluene</td><td align="center" valign="middle" >Acetonitrile</td></tr><tr><td align="center" valign="middle" >EtNH<sub>2</sub> NH<sub>3</sub> t-BuNH<sub>2</sub> Et<sub>2</sub>NH</td><td align="center" valign="middle" >1 &#224; 3a 1 &#224; 3b 1 &#224; 3c 1 &#224; 3d</td><td align="center" valign="middle" >45.8 52.2 53.1 57.0</td><td align="center" valign="middle" >7.2 10.1 16.7 20.9</td><td align="center" valign="middle" >38.6 42.1 36.4 36.1</td></tr></tbody></table></table-wrap><p>proton in addition to the other one which is used for intramolecular hydrogen bond (<xref ref-type="fig" rid="fig2">Figure 2</xref>). It is explained rationally that stabilization by such hydrogen bond of this free amino proton in 3b surrounded by acetonitrile would contribute to additional decrement of ΔE<sub>1</sub> on the reaction of 1 with ammonia compared to the cases using the other three amines.</p></sec><sec id="s2_5"><title>2.5. Conclusion</title><p>The unexpected order of the reaction rate (ethylamine &gt; ammonia &gt; t-butylamine &gt; diethylamine) on the aromatic nucleophilic substitution of 1-dimetylamino-2,4-bis(trifluoroacetyl)naphthalene 1 with nucleophiles (ammonia and three kinds of aliphatic amine) giving the corresponding N-N exchanged products 2 is rationalized by the energy changes for forming the corresponding Meisenheimer complexes 3, i.e. the rate determining step of the present substitution reaction. These energy changes are closely correlated with the relative stabilities of 3 under the reaction conditions. Intramolecular hydrogen bond between amino proton in 1-amino group and carbonyl oxygen in 2-trifluoroacetyl group stabilizes Meisenheimer complexes 3 effectively, and accelerates the substitution reaction from 1 to 2, consequently. Our calculation results also predict that the above order of amines is also true if less polar toluene is used as a solvent instead of acetonitrile even though more enhanced conditions are required.</p></sec></sec><sec id="s3"><title>3. Computational Methods</title><p>All calculations employed in this paper were accomplished by making use of the computer programs packages PC SPARTAN 16 [<xref ref-type="bibr" rid="scirp.86423-ref20">20</xref>] . For geometrical optimizations, it was performed with the 6-31G* basis set at B3LYP [<xref ref-type="bibr" rid="scirp.86423-ref21">21</xref>] level. For a solvation calculation, C-PCM model [<xref ref-type="bibr" rid="scirp.86423-ref22">22</xref>] was used. The starting geometries employed for all optimizations were resulted from molecular mechanics using SYBYL [<xref ref-type="bibr" rid="scirp.86423-ref23">23</xref>] force field and subsequent semi-empirical PM3 [<xref ref-type="bibr" rid="scirp.86423-ref24">24</xref>] optimizations.</p></sec><sec id="s4"><title>Conflicts of Interest</title><p>The authors declare no conflicts of interest regarding the publication of this paper.</p></sec><sec id="s5"><title>Cite this paper</title><p>Ota, N., Nakada, T., Shintani, T., Kamitori, Y. and Okada, E. (2018) Computational Study for the Aromatic Nucleophilic Substitution Reaction on 1-Dimethylamino-2,4-bis(trifluoroacetyl)- naphthalene with Amines. International Journal of Organic Chemistry, 8, 273-281. https://doi.org/10.4236/ijoc.2018.83020</p></sec></body><back><ref-list><title>References</title><ref id="scirp.86423-ref1"><label>1</label><mixed-citation publication-type="other" xlink:type="simple">Hojo, M., Masuda, R. and Okada, E. 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