<?xml version="1.0" encoding="UTF-8"?><!DOCTYPE article  PUBLIC "-//NLM//DTD Journal Publishing DTD v3.0 20080202//EN" "http://dtd.nlm.nih.gov/publishing/3.0/journalpublishing3.dtd"><article xmlns:mml="http://www.w3.org/1998/Math/MathML" xmlns:xlink="http://www.w3.org/1999/xlink" dtd-version="3.0" xml:lang="en" article-type="research article"><front><journal-meta><journal-id journal-id-type="publisher-id">MRI</journal-id><journal-title-group><journal-title>Modern Research in Inflammation</journal-title></journal-title-group><issn pub-type="epub">2169-9682</issn><publisher><publisher-name>Scientific Research Publishing</publisher-name></publisher></journal-meta><article-meta><article-id pub-id-type="doi">10.4236/mri.2015.43003</article-id><article-id pub-id-type="publisher-id">MRI-63714</article-id><article-categories><subj-group subj-group-type="heading"><subject>Articles</subject></subj-group><subj-group subj-group-type="Discipline-v2"><subject>Medicine&amp;Healthcare</subject></subj-group></article-categories><title-group><article-title>
 
 
  First Detection of Human Polyomaviruses in HIV Patients with Suspected Neurological Disease in Monter&#237;a, Colombia
 
</article-title></title-group><contrib-group><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>aneza</surname><given-names>Tique</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Samia</surname><given-names>Barrera</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Salim</surname><given-names>Mattar</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref><xref ref-type="corresp" rid="cor1"><sup>*</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Jorge</surname><given-names>Miranda</given-names></name><xref ref-type="aff" rid="aff1"><sup>1</sup></xref></contrib><contrib contrib-type="author" xlink:type="simple"><name name-style="western"><surname>Francisco</surname><given-names>Camargo</given-names></name><xref ref-type="aff" rid="aff2"><sup>2</sup></xref></contrib></contrib-group><aff id="aff1"><addr-line>University of Cordoba, Instituto de Investigaciones Biologicas del Tropico, Córdoba, Colombia</addr-line></aff><aff id="aff2"><addr-line>Clinica Zayma, Intensive Care Unit, Monteria, Cordoba</addr-line></aff><author-notes><corresp id="cor1">* E-mail:<email>mattarsalim@hotmail.com(SM)</email>;</corresp></author-notes><pub-date pub-type="epub"><day>24</day><month>02</month><year>2016</year></pub-date><volume>04</volume><issue>03</issue><fpage>25</fpage><lpage>31</lpage><history><date date-type="received"><day>18</day>	<month>November</month>	<year>2015</year></date><date date-type="rev-recd"><day>accepted</day>	<month>21</month>	<year>February</year>	</date><date date-type="accepted"><day>24</day>	<month>February</month>	<year>2016</year></date></history><permissions><copyright-statement>&#169; Copyright  2014 by authors and Scientific Research Publishing Inc. </copyright-statement><copyright-year>2014</copyright-year><license><license-p>This work is licensed under the Creative Commons Attribution International License (CC BY). http://creativecommons.org/licenses/by/4.0/</license-p></license></permissions><abstract><p>
 
 
  Objective: The objective is to establish the presence of JC and/or BK polyomavirus in HIV patients with symptoms of encephalitis and/or meningitis. Methodology: From September 2009 to December 2011, a prospective study was conducted. 34 HIV patients with symptoms consistent with encephalitis and/or meningitis were included. The work was conducted in 3 hospitals in the city of Monteria. Viral DNA extraction was performed on samples of cerebrospinal fluid (CSF) using a commercial kit (Quiagen, USA). The detection of BKV and JCV was performed by multiplex real-time PCR (LightMix
  ?, Roche Diagnostics, Germany) with primers specific for the short t antigen gene fragment, labeled probes and one internal control. Results: In 9 (26%) of 34 patients included in the study, JCV virus was detected; only 1 (3%) patient had coinfection with JCV/BKV. The mortality rate was 3%. The cytochemical examination of CSF in positive patients presented average values: 40.7 mg/dL glucose, 171.66 mg/dL protein, 19.8 mm
  <sup>3 </sup>
  leukocytes, and 109.8 mm
  <sup>3</sup>
   
  erythrocytes. Conclusion: The findings demonstrate that JCV and BKV have a significant occurrence in HIV patients with CSF infections in Monteria. 
 
</p></abstract><kwd-group><kwd>Progressive Multifocal Leukoencephalopathy</kwd><kwd> Meningitis</kwd><kwd> Encephalopathy</kwd><kwd> AIDS</kwd></kwd-group></article-meta></front><body><sec id="s1"><title>1. Introduction</title><p>Human polyomaviruses belong to the family Papovaviridae. BK virus (BKV) and JCV virus are the principal members of this group that affect human beings [<xref ref-type="bibr" rid="scirp.63714-ref1">1</xref>] [<xref ref-type="bibr" rid="scirp.63714-ref2">2</xref>]</p><p>Nearly 70% to 80% of healthy people have antibodies against BKV and JCV [<xref ref-type="bibr" rid="scirp.63714-ref3">3</xref>] [<xref ref-type="bibr" rid="scirp.63714-ref4">4</xref>] . Initial infection with both BKV and JCV occurs commonly in childhood or in adolescence and is generally asymptomatic [<xref ref-type="bibr" rid="scirp.63714-ref5">5</xref>] . These viruses can persist latently in many sites, including kidneys, CNS and lymphoid cells. Recrudesce of latent infection may then occur in immunocompromised individuals [<xref ref-type="bibr" rid="scirp.63714-ref6">6</xref>] .</p><p>The occurrence of BKV and JCV in people infected with human immunodeficiency virus (HIV) ranges from 20% - 44% [<xref ref-type="bibr" rid="scirp.63714-ref7">7</xref>] . In immunecompromised patients, JCV is the main etiologic agent of progressive multifocal leukoencephalopathy (PML), a fatal neurological disease, as well as granular cell neuropathy, encephalopathy and meningitis, the BKV is associated with hemorrhagic cystitis in stem cell transplantation (HSCT) hematopoietic and interstitial nephropathy in kidney transplant recipients, it has recently been shown that is associated with neurological complications [<xref ref-type="bibr" rid="scirp.63714-ref4">4</xref>] [<xref ref-type="bibr" rid="scirp.63714-ref8">8</xref>] [<xref ref-type="bibr" rid="scirp.63714-ref9">9</xref>] .</p><p>Nonetheless, PML prevalence frequently increases during AIDS epidemics, where up to 5% of AIDS patients may develop the disease. In fact, the mortality associated with PML has also expanded from 1.5 per ten million people in the initial HIV era to 6.1 deaths per ten million persons in the post HIV era [<xref ref-type="bibr" rid="scirp.63714-ref9">9</xref>] .</p><p>Currently, a new PML presentation has appeared among patients managed with immunomodulatory drugs for autoimmune diseases [<xref ref-type="bibr" rid="scirp.63714-ref9">9</xref>] - [<xref ref-type="bibr" rid="scirp.63714-ref11">11</xref>] . BKV is associated with hemorrhagic cystitis in hematopoietic stem cell transplantation recipients and interstitial nephropathy in kidney transplant recipients and has lately also been demonstrated to be related to neurologic exacerbations [<xref ref-type="bibr" rid="scirp.63714-ref4">4</xref>] .</p><p>There are about 1.7 million people infected with HIV in Latin America and 250,000 in the Caribbean in Colombia in 2014, In Cordoba, 9700 cases were reported, with a mortality rate of 6.7% and 380 of these cases were notified as HIV/AIDS positive [<xref ref-type="bibr" rid="scirp.63714-ref12">12</xref>] - [<xref ref-type="bibr" rid="scirp.63714-ref14">14</xref>] .</p><p>Between 1992-2000 in Brazil and Mexico, the prevalence of PML in postmortem samples of patients confirmed with AIDS was between 0.8% and 3% [<xref ref-type="bibr" rid="scirp.63714-ref15">15</xref>] . In Colombia, only four cases of polyomavirus infection have been reported, Triana et al., [<xref ref-type="bibr" rid="scirp.63714-ref16">16</xref>] reported the first case of PML in Latin America and Colombia (Bogot&#225;) associated with natalizumab in a patient with a diagnosis of multiple sclerosis; the virus was identified in brain biopsy using the technique of in situ hybridization. In Cali, Cadavid et al. [<xref ref-type="bibr" rid="scirp.63714-ref17">17</xref>] studied two patients with kidney transplants; BKV was identified by immunohistochemistry in a kidney biopsy. However, there are no studies in Colombia on polyomavirus in HIV individuals associated with neurologic disease.</p><p>The objective of this study was to detect JCV and BKV in HIV patients with symptoms consistent with encephalitis and/or meningitis.</p></sec><sec id="s2"><title>2. Materials and Methods</title><sec id="s2_1"><title>2.1. Patients and Specimens</title><p>34 CSF specimens were collected from HIV patients with suspected meningitis and/or encephalitis between September 2009 and December 2011, at the San Jer&#243;nimo of Monteria hospital main clinical center of third level of care of the department of Cordoba. 25 patients were males and 9 females aged 3 - 63 years. CSFs were frozen at −80˚C until processing. The selection of patients was independent of group age, gender and membership in health system, the selection criteria were: patients with diagnosis of suspected encephalitis [<xref ref-type="bibr" rid="scirp.63714-ref18">18</xref>] was defined as: fever, headache, convulsions, signs of brain involvement, such as alteration of consciousness and/or personality, seizures and focal neurologic signs and the diagnosis of suspected meningitis [<xref ref-type="bibr" rid="scirp.63714-ref19">19</xref>] was defined as: fever, headache, neck stiffness.</p></sec><sec id="s2_2"><title>2.2. Molecular Detection of JC and BK Viruses</title><p>Polyomavirus DNA was extracted from 200 μl of CSF samples using a resin column kit (Quiagen, USA Cat. 51306) according to the manufacturer’s instructions. The DNA was kept at −20˚C until processing. To detect JCV and BKV a kit LightMix&#174; polyomaviruses JC and BK (Cat-40-0203-32, Roche Diagnostics, Tibmolbiol), multiplex PCR in real-time was performed. The kit amplifies a fragment of the gene encoding t antigen 175 bp (BKV) and 172 bp (JCV). In each test negative and positive controls and internal standards were included; those were used to generate viral load curves for JCV and BKV (10<sup>1</sup> to 10<sup>6</sup>).</p></sec><sec id="s2_3"><title>2.3. Laboratory Data</title><p>The CSFs were analyzed by: tests of glucose and protein levels, cell count of leukocytes and erythrocytes, Chinese ink, Gram staining, Ziehl-Neelsen and culture.</p></sec><sec id="s2_4"><title>2.4. Ethics</title><p>Institutional standard guidelines of the Minister of Health of Colombia and University of Cordoba ethics committee were followed for the collection of patient’s CSF samples after obtaining their written informed consent for involvement in the study. All ethics issues were according to the resolution number 8430 of 1993 [<xref ref-type="bibr" rid="scirp.63714-ref20">20</xref>] . During the study confidentiality of the information was maintained.</p></sec><sec id="s2_5"><title>2.5. Statistics</title><p>Chi-square test and ANOVA were used for statistical analysis. Analysis was performed in EpiInfo Version 7.1 (CDC, Atlanta) software. P &lt; 0.05 was considered significant.</p></sec></sec><sec id="s3"><title>3. Results</title><p>Between September 2009 and December 2011, 34 HIV patients with neurological manifestations were studied. The median age of the cohort was 33.5 years (range, 3 - 63 years); of these 34 patients 25 (74%) were male and 9 (26%) were female.</p><sec id="s3_1"><title>3.1. Clinical Features</title><p>The following clinical manifestations were found in 34 patients: 28 (82%) patients presented with headache, 20 (59%) fever, 14 (41%) nausea, 12 (35%) neck rigidity, 11 (33%) convulsions, 8 (24%) altered mental status, 7 (21%) decrease of the muscular force, 4 (12%) irritability, 3 (9%) disartria, 2 (6%) hipoestesia and 1 (3%). flaccid paralysis. CSF samples showed opportunistic pathogens in 6 of 34 (18%) patients; 4 (12%) patients had Cryptococcus neoformans and 2 (6%) were infected by Treponema pallidum. The hematological and biochemical parameters were as follows: leukocyte count (average 54.03/mm<sup>3</sup>), predominantly mononuclear (average 15%), erythrocyte count (average 44.96 mm<sup>3</sup>), glucose levels (average 35.12 mg/dl), and increase in protein (average 130.11 mg/dl).</p></sec><sec id="s3_2"><title>3.2. Detection of JCV and BKV in CSF</title><p>JCV was detected in 9/34 patients (26%), with a mean viral load of 1.535 copies/&#181;l (range, 500 ? 1,000,000 copies/&#181;l). One patient (3%) had coinfection with JCV/BKV; a viral load of 850 copies/&#181;l of JCV and 650 copies/&#181;l of BKV were found. Viral load, PCR and hematological and biochemical parameters are described in <xref ref-type="table" rid="table1">Table 1</xref>. There were no significant differences in the age, sex, clinical manifestations and patients with infection by JCV and BKV.</p></sec><sec id="s3_3"><title>3.3. Clinical Presentation of Patients with Infection by JCV and BKV</title><p>The median age was 35 years (range, 3 - 62 years). Only one of 34 (3%) patients died with infection by JCV (<xref ref-type="table" rid="table1">Table 1</xref>). Patients with JCV or BKV infection presented the following signs and symptoms: headache (80%), fever (70%), seizures (40%), vomiting (40%) and nausea, decreased muscle strength, nuchal rigidity and hypoesthesia, altered mental status were seen with less frequency (<xref ref-type="table" rid="table1">Table 1</xref>). Ten patients showed glucose average of 40.7 mg/dl, protein levels had an average of 171.66 mg/dl, protein levels were elevated in only 3 patients. Regarding hematological patterns, the leukocytes had an average of 19.8 mm<sup>3</sup>, erythrocytes had an average of 109.8 mm<sup>3</sup>, predominantly mononuclear 10%, in 3 patients the leukocyte count was elevated (<xref ref-type="table" rid="table1">Table 1</xref>).</p></sec></sec>
<sec id="s4">
<title>4. Discussion</title>
<p>This is the first prospective study carried out in Colombia in HIV patients infected by JCV and BKV; all HIV patients enrolled in the study had suspected meningitis or encephalitis. The overall prevalence was 26% for polyomavirus and 3% of coinfection with JCV/BKV. The frequency of infection with JCV was significantly higher than other studies, which reported infection rates of 6% with JCV and coinfections with JCV/BKV in only 3.3% (<xref ref-type="table" rid="table1">Table 1</xref>). In several studies carried out in urine samples, cervical carcinoma, semen and saliva, the detection</p></sec></body>
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